BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A01SP1|AL429492
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1152 1696 0.0
>3x_Contig1152
Length = 5366
Score = 1696 bits (855), Expect = 0.0
Identities = 866/869 (99%), Gaps = 1/869 (0%)
Strand = Plus / Plus
Query: 5 ttatttcattttaaaggttaatttcttttaaaacagaacaattgtacatcacgtgatcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1638 ttatttcattttaaaggttaatttcttttaaaacagaacaattgtacatcacgtgatcat 1697
Query: 65 tgttccctcttcaaataatgcaactccaattctgatcggcgaagatactgaccattgagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 tgttccctcttcaaataatgcaactccaattctgatcggcgaagatactgaccattgagc 1757
Query: 125 tgagtggatccatggtattatcaacggtggcaagggctcattagaaccttgtttatttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 tgagtggatccatggtattatcaacggtggcaagggctcattagaaccttgtttatttca 1817
Query: 185 atttgttctgttttcttctttaggaaatgtaactatgtaaccaaaaatgtgtaaaatctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 atttgttctgttttcttctttaggaaatgtaactatgtaaccaaaaatgtgtaaaatctt 1877
Query: 245 aacgagtttcacttagttcactcaaagcatctcaaacaagataacattatcaattgarag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1878 aacgagtttcacttagttcactcaaagcatctcaaacaagataacattatcaattgaaag 1937
Query: 305 gtgatatatcagggaacctaggattatttagctgcttagtaggtttgataaaattgctga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 gtgatatatcagggaacctaggattatttagctgcttagtaggtttgataaaattgctga 1997
Query: 365 attagcatttggataatagtggcagtatatatccatagaacacaggaagacaaacggtta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 attagcatttggataatagtggcagtatatatccatagaacacaggaagacaaacggtta 2057
Query: 425 acaatattatgtcctcacctccagctcaacaaccaagttcaccaaatttgttttatgatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 acaatattatgtcctcacctccagctcaacaaccaagttcaccaaatttgttttatgatc 2117
Query: 485 ctagctcttctccagctcctcatggtacacaggattcccaggcatctcaagaccgaggcg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 ctagctcttctccagctcctcatggtacacaggattcccaggcatctcaagaccgaggcg 2177
Query: 545 taggctcttctccgtttcactatccttcgtcttcgtcaaatgccacgcaagagacggctc 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2178 taggctcttctccgtttcactatccttcgtcttcgtcaaatgccacgcaagacacggctc 2237
Query: 605 gcgccgctcctagtagcagtggtttaagatctaacaatttgagatctgatctattgaact 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 gcgccgctcctagtagcagtggtttaagatctaacaatttgagatctgatctattgaact 2297
Query: 665 attcatcctctctatcctcaagtgcaagagagggaagacactctagatctagaagaggcg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 attcatcctctctatcctcaagtgcaagagagggaagacactctagatctagaagaggcg 2357
Query: 725 aaattaatgcatctgacttatcatctcccagaagaattgtcactttcaataacctttcct 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 aaattaatgcatctgacttatcatctcccagaagaattgtcactttcaataacctttcct 2417
Query: 785 catcggataatggattttcatcatcatcgagacctgcatctgaagctgctgatcaacctt 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 catcggataatggattttcatcatcatcgagacctgcatctgaagctgctgatcaacctt 2477
Query: 845 tgaagatcatctggggta-caatgtttcg 872
|||||||||||||||||| ||||||||||
Sbjct: 2478 tgaagatcatctggggtaccaatgtttcg 2506
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7500
Number of Sequences: 1807
Number of extensions: 7500
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)